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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905632.1_cds_XP_016455887.1_49775
CDS Infomation

[gene=LOC107779900] [db_xref=GeneID:107779900] [protein=probable 2-oxoglutarate-dependent dioxygenase AOP1.2] [protein_id=XP_016455887.1] [location=join(39..361,1543..1864,2192..2335)] [gbkey=CDS]
Sequence

ATGAGCCCAAGTTCAAGTTGTTGGAATTCAACATGCCAAGATGTTAAAAAAGCTTTCGAA
ATCTATGGCTGTTTCTTAGCAATCTATGAAGAAATTTCAATGGAGCAGTGTAAAGAACTT
TTCCGGGAATTGGAGAAGTTGTTTGATTTACCTGTGGAGACCAAAGCTAAAAACACTTCG
AAAACTCCTTATTTTGGTTATATTGGACCAGAATCCTATACTCGGCCTCTTTATGAAAGC
ATGGGAATTGAGAATGCCACCAATCTTGAATCAGTTCAAAGCTTCACAAATCTCATGTGG
CCTTCTGGAAATACTCATTTTTGTGGACTACTTCATTACCATGCAAAGCAAATGCTGGAA
CTAGACAACATGGTGACAAGAACGATGTTTGCAAGCTATGGTGTGGATAAATATCATAAA
TCGTGTGTTAAATCTAAGGGTAACCTTGTTCGTGTCATGAAATATGGAGTTCCAAAGTCC
GATGAGCCTAACGTTGGTCTTCCACCTCATAGTGACAAGGGCTTCACTACTATACTCCAT
CAAAATCAAGTAAATGGTTTGGAGATCGAAACAAAGGATGGTCATTGGATTTCTGTAGAA
TTTCCTCCTTCATCCTTTATTGTTATCGCGGGTGATGCACTTAAGGAATGGAGCAACGAC
AGAATACATGCTGTTACACATAGAGTTACAATGAGTGGAAATGAATCAAGATATTCACTT
GGGCAATTTTCACATCCACAGAAGATAGGAACACTAGAAGAGCTCATTGTTTCATCCTCT
GCAGTTTAA

Peptide Sequence

PEP ID

XP_016455887.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1.2 [Nicotiana tabacum]
Sequence

MSPSSSCWNSTCQDVKKAFEIYGCFLAIYEEISMEQCKELFRELEKLFDLPVETKAKNTS
KTPYFGYIGPESYTRPLYESMGIENATNLESVQSFTNLMWPSGNTHFCGLLHYHAKQMLE
LDNMVTRTMFASYGVDKYHKSCVKSKGNLVRVMKYGVPKSDEPNVGLPPHSDKGFTTILH
QNQVNGLEIETKDGHWISVEFPPSSFIVIAGDALKEWSNDRIHAVTHRVTMSGNESRYSL
GQFSHPQKIGTLEELIVSSSAV

Transcript Sequence

Gene sequence data has not been registered.